Riddha Manna, Tomislav Štampar, Ivan Tomić and Ana Marija Jakšić. (2026) End-to-end automation of behavioural experiments with a collaborative robot. (Submitted)

 

Samuel Bourgeat, Fani Derveni, Pedro M. Reis, and Ana Marija Jakšić. (2026) Complex physical structure of the whole brain predicts individual behaviours. (Submitted)

 

Riddha Manna, Johanni Brea, Gonçalo Vasconcelos Braga, Alireza Modirshanechi, Ivan Tomić and Ana Marija Jakšić. (2026)  Learning is a fundamental source of behavioral individuality. eLife  DOI:10.7554/eLife.111235

 

Samuel Bourgeat, Fani Derveni, Victoire Gamblin, Ece Naz Bilgiç, Feyza Nur Arslan, Andrew Oates, Can Aztekin, Fides Zenk, Pedro M. Reis, and Ana Marija Jakšić. (2025) TopoTome: Topology-informed unsupervised segmentation and analysis of 3D images. bioRxiv DOI:10.1101/2025.09.26.678737 (In review)

 

Hsu S.K., Lai W.Y., Novak J., Lehner F., Jakšić A.M., Versace E., Schlötterer C. (2024) Pre- and post-mating reproductive isolation arise during adaptation to a novel hot environment. Accepted. Genome Biology, DOI: 10.1186/s13059-024-03285-9

 

Lai W.Y., Nolte V., Jakšić A.M., Schlötterer C. (2024) Evolution of phenotypic variance provides insights into the genetic basis of adaptation. Genome Biology and Evolution, DOI: 10.1093/gbe/evae077 

 

Gehin C., [...79 authors…], Jakšić A.M., McCabe B.D., De Los Rios P., Hornemann T., D'Angelo G., Gennarino V.A. (2023) CERT1 mutations perturb human development by disrupting sphingolipid homeostasis. Journal of  Clinical Investigation, DOI:10.1172/JCI165019.

 

Hsu S.K., Jakšić A.M., Nolte V., Lirakis M., Kofler R., Barghi N., Versace E., Schlötterer C. (2020) Rapid sex-specific adaptation to temperature in Drosophila. eLife. DOI: 10.7554/eLife.53237

  

Jakšić A.M., Karner J., Nolte V., Hsu S., Barghi N., Mallard F., Otte K.A., Svečnjak L., Senti K.A., Schlötterer C. (2020) Neuronal function and dopamine signaling evolve at high temperature in Drosophila. Molecular Biology and Evolution. DOI: 10.1093/molbev/msaa116

 

Hsu S., Jakšić A.M., Nolte V., Barghi N., Mallard F.J., Otte K.A., Schlötterer C. (2019) A 24h age difference causes twice as much gene expression divergence as 100 generations of adaptation to a novel environment. Genes. DOI: 10.3390/genes10020089

 

Barghi N., Tobler R., Nolte V., Jakšić A.M., Mallard F., Otte K., Dolezal M., Taus T., Kofler R., Schlötterer C. (2019) Polygenic adaptation fuels genetic redundancy in Drosophila. PLoS Biology. DOI: 10.1101/332122

 

Mallard F.J., Jakšić A.M., Schlötterer C. (2018) Contesting the evidence for non-adaptive plasticity. Nature. DOI: 10.1038/nature25496

 

Jakšić A.M., Kofler R., Schlötterer C. (2017) Regulation of transposable elements: interplay between TE‐encoded regulatory sequences and host‐specific trans‐acting factors in Drosophila melanogaster. Molecular Ecology. DOI: 10.1111/mec.14259

 

Jakšić A.M., Schlötterer C. (2016) The Interplay of Temperature and Genotype on Patterns of Alternative Splicing in Drosophila melanogaster. Genetics. DOI: 10.1534/genetics.116.192310